PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn184391
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Nin-like
Protein Properties Length: 1039aa    MW: 115308 Da    PI: 5.9718
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn184391genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.34.7e-26607680152
      RWP-RK   1 aekeisledlskyFslpikdAAkeLg......................vclTvLKriCRqyGIkRWPhRkiksl 52 
                 aek+isle+l++yF +++kdAAk+Lg                      vc+T++KriCRq+GI RWP+Rki+++
  Achn184391 607 AEKSISLEVLQQYFTGSLKDAAKSLGdfcfkddlateiesltmiltftVCPTTMKRICRQHGITRWPSRKINKV 680
                 589*********************************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151914.322593700IPR003035RWP-RK domain
PfamPF020425.1E-23611680IPR003035RWP-RK domain
SMARTSM006663.2E-259431025IPR000270PB1 domain
PROSITE profilePS5174525.3929431025IPR000270PB1 domain
PfamPF005645.8E-199431024IPR000270PB1 domain
SuperFamilySSF542773.27E-229431027No hitNo description
CDDcd064078.05E-389441024No hitNo description
Gene3DG3DSA:3.10.20.2404.8E-269441025No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0010118Biological Processstomatal movement
GO:0010167Biological Processresponse to nitrate
GO:0042128Biological Processnitrate assimilation
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1039 aa     Download sequence    Send to blast
MYSGLVILVG FNIGLNIVDH REKTPAKSLQ KMSEADDEYQ TSFRKSREPL MDLVLDGSWP  60
FDQIFSANPT SPFFISSAEQ PFSPLWAFSD DNGDKLAGDA TSTLSGGHRL SEYPRLFSCN  120
PESVTESQAR TGNKRRLSTP CLELTRIDYP DGSCVIKERM TQALRYFKES TEQHVLAQVW  180
APVKNGGGYL LTTSGQPFVL DPHSNELHQY RMVSLMYMFS VDGESDGVLG LPGRVFQQKL  240
PEWTPNVQYY SSKEYPRLTH ALHYNVQGTL ALPVFEPSGQ SCIGVLELIM TSPKINYAPE  300
VDKVCKALEY VVNVLVNQIC NEGRQKALVE ILEILTVVCE THKLPSAQTW VPCRHRSVLA  360
NGGGLKKSCS SFDGSCMGQI CMSTTEVAFY VVDAHMWGFR EACAEHHLQK GQGVAGRAFA  420
SHNSCFCEDI TQFCKTEYPL VHYARMFGLT SSFAICLRSS HTGNDDYILE FFLPPHIRDH  480
RDQRTLLDSI LVTLKQHFWS LRVASGKELE EEGRCIEIIK ASMNEKLDLG LQSDQISQSA  540
ILPPYTEALP NAPEMMNLES REQQLRIEVG AKNSGGCVGG AGGNQNVVSL PEQKNVSKKP  600
ERKRGKAEKS ISLEVLQQYF TGSLKDAAKS LGDFCFKDDL ATEIESLTMI LTFTVCPTTM  660
KRICRQHGIT RWPSRKINKV NRSLSRLKRV IESVQGAEGA FTLTSIATCS LPVAVNPILW  720
PASVNGSNQQ NSAGYKPSEL MEENNESTTL KKHRNHGHDV ATNQMLRDGV LCREEVVHEQ  780
NGFLRELGEG TSRSKTGSGS REESTGTPTS HDSYQGSPYL RNASTPQNDP TISPIHEKYI  840
KIDSSSELLY QSAKELTLSA AFSIPDALIT TEVQEPFGGM LIEDAGSSHN LRNLCPAAEA  900
FLEEQPPEYG WTNPLGAELE PREAMANPAE RMPLFFAGPE VKTMTIKATY KEDIIRFRLS  960
LDSGIVRLKE EVAKRLKLEM GTFDIKYLDD DHEWVLIACD ADLQECVDIS KSSGSNMIRL  1020
LVHDVSANPA SSCESSGR*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00449DAPTransfer from AT4G24020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070353.10.0PREDICTED: protein NLP7 isoform X1
SwissprotQ84TH90.0NLP7_ARATH; Protein NLP7
TrEMBLF6HU520.0F6HU52_VITVI; Putative uncharacterized protein
STRINGVIT_02s0025g02070.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52232239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.10.0NIN like protein 7